All Categories (1-12 of 12)

1. BNNTs

   Animations | 21 Aug 2022 | Contributor(s):: Shawna Lee-Paul, Rice University

   Boron nitride nanotubes (BNNTs) are nano particles with unique properties, including high mechanical strength, high thermal conductivity, and neutron shielding capacity. These properties are beneficial for numerous applications, such as aerospace, electronics, and energy-efficient...

2. Characterization - Scanning Electron Microscopy

   Online Presentations | 11 Jan 2022 | Contributor(s):: Atilla Ozgur Cakmak, NACK Network

3. Winter Interactive nanoBIO Workshop

   Workshops | 04 Feb 2021 | Contributor(s):: Ballard, Joshua Brendan (editor)

   The Winter Interactive nanoBIO Workshop will walk students and researchers through how to understand a variety of biological problems using simulations based on cloud-based tools on nanoHUB or other easy to use platforms.

4. Deep Learning for Time Series Illustrated by COVID-19 Infection Studies

   Online Presentations | 04 Feb 2021 | Contributor(s):: Geoffrey C. Fox

   We show that one can study several sets of sequences or time-series in terms of an underlying evolution operator which can be learned with a deep learning network.

5. Biology of COVID-19 Attack on Epithelial Cells, understood from a Modeling and Simulation Perspective

   Online Presentations | 04 Feb 2021 | Contributor(s):: Paul Macklin

   n this session, we describe a community-driven effort to iteratively develop a multiscale, spatially-resolved open source model of SARS-CoV-2 dynamics and immune response in tissues.

6. Understanding COVID-19 Infection, Immune Response, and Drug Therapy through Multiscale, Multicellular Modeling and Simulation

   Online Presentations | 10 Dec 2020 | Contributor(s):: T.J. Sego

   This workshop presents an open-source Python- and XML-scripted multiscale modeling and simulation framework of an epithelial tissue infected by a virus, a simplified cellular immune response and viral and immune-induced tissue damage and shows how to use it to model basic patterns of infection...

7. Saliva-Based Testing for COVID-19

   Online Presentations | 22 Nov 2020 | Contributor(s):: Mohit Verma

   The Verma lab is developing a molecular test for SARS-CoV-2 that detects the RNA and produces a color change in less than one hour. Using saliva as the sample, this test is easier to use at the point-of-care.

8. PhysiBoSS simulation of COVID19 infection

   Tools | 27 Oct 2020 | Contributor(s):: Vincent Noel, Miguel Ponce de Leon, Anna Niarakis, Laurence Calzone, Alfonso Valencia, Arnau Montagud

   PhysiBoSS-COVID: the Boolean modelling of COVID-19 signalling pathways in a multicellular simulation framework

9. Multiscale Multicellular Modeling of Tissue Function and Disease using CompuCell3D

   Online Presentations | 03 Jun 2020 | Contributor(s):: James A Glazier, Juliano Ferrari Gianlupi

   Multiscale multicellular models combine representations of subcellular biological networks, cell behaviors, tissue level effects and whole body effects to describe tissue outcomes during development, homeostasis and disease. I will briefly introduce these simulation methodologies, the CompuCell3D...

10. COVID 19 Virtual Tissue Model - Tissue Infection and Immune Response Dynamics

    Tools | 26 May 2020 | Contributor(s):: T.J. Sego, Josua Oscar Aponte-Serrano, Juliano Ferrari Gianlupi

    Simulates tissue and immune system interactions during a viral lung infection

11. Shape Changing Nanocontainers Tutorial

    Online Presentations | 22 Apr 2020 | Contributor(s):: Vikram Jadhao

    Course material companion materials for nanoparticle shape lab. Four files are associated with this course material: two video lectures, companion powerpoint slides, and a homework problem set.

12. A virion endocytosis tissue simulator

    Tools | 13 Apr 2020 | Contributor(s):: Yafei Wang, Randy Heiland, Paul Macklin

    Simulate virus endocytosis (internalization), ACE2 receptor dynamics with PhysiCell